Book review: Bioinformatics with Python Cookbook, 3rd Edition.
Bioinformatics with Python Cookbook: Use modern Python libraries and applications to solve real-world computational biology problems, 3rd Edition.
REBELSCIENCE articles
ArchiveBioinformatics in python
Genome Toolkit. Part 2: In Search of Patterns
First function – counting patterns in a sequence.
Genome Toolkit. Part 1: Project Setup
Welcome to the new series, called “Genome Toolkit”. In this series, we will write a set of tools, that will help us find and build statistical data around any DNA, RNA and Protein sequences.
Getting started in Bioinformatics: A step-by-step guide.
A guide and advice on how to get started, or how to transition into Bioinformatics for people with biology or programming backgrounds.
Tips & Tricks: Hamming Distance
Let’s look at how we can program Hamming Distance algorithm in three different ways.
From Python to Rust: Part 1.
In this series of articles, we will explore a young and very exciting programming language — Rust. We will see how Rust can help us
DNA Toolkit Part 5, 6 & 7: Open Reading Frames, Protein Search in NCBI database
In this article, we conclude our work on a minimal set of functions to work with DNA. We will add the last three functions that
DNA Toolkit Part 4: Translation, Codon Usage
In this article we are taking a look at DNA Codon table and adding a Translation and Codon Usage functions to our DNA Toolkit.
DNA Toolkit Part 3: GC Content Calculation
In this article we add GC Content Calculation functions to the DNA Toolkit
Let’s set up a code editor for Python and Bioinformatics
In this article we install and set-up VSCode/VSCodium editor and a few plugins to make running any code easy, with just a key combination.