rebelScience
  • About
    • Telegram
    • Twitter
    • Mastadon
    • Matrix
    • LBRY
    • Medium
    • Patreon
  • Blog
  • YouTube
  • Forum
  • Support

Bioinformatics in python

bioinformatics podcast
Podcast

Getting started in Bioinformatics: A step-by-step guide.

A guide and advice on how to get started, or how to transition into Bioinformatics for people with biology or programming backgrounds.

By rebelCoder, 2 yearsAugust 31, 2020 ago
Tips & Tricks

Tips & Tricks: Hamming Distance

Let’s look at how we can program Hamming Distance algorithm in three different ways.

By rebelCoder, 2 yearsAugust 16, 2020 ago
Bioinformatics Tools

Bioinformatics Tools Programming in Python with Qt. Part 2.

DNA Engine project structure and class setup.

By rebelCoder, 2 yearsJune 24, 2020 ago
Bioinformatics Tools

Bioinformatics Tools Programming in Python with Qt. Part 1.

In Part 1 we look at PyQT setup, Qt Designer, UI converter tool and write a test application.

By rebelCoder, 2 yearsJune 8, 2020 ago
From Python To Rust Series

From Python to Rust: Part 1.

In this series of articles, we will explore a young and very exciting programming language — Rust. We will see how Rust can help us to speed up some of our existing and future Python code. Many agree, that the key features of Python are its simplicity and readability. Let’s Read more…

By rebelCoder, 2 yearsMay 17, 2020 ago
DNA Toolkit Series

DNA Toolkit Part 5, 6 & 7: Open Reading Frames, Protein Search in NCBI database

In this article, we conclude our work on a minimal set of functions to work with DNA. We will add the last three functions that will help us to search for proteins in DNA sequences by generating reading frames. We will also apply our code to a real piece of Read more…

By rebelCoder, 2 yearsApril 26, 2020 ago
DNA Toolkit Series

DNA Toolkit Part 4: Translation, Codon Usage

In this article we are taking a look at DNA Codon table and adding a Translation and Codon Usage functions to our DNA Toolkit.

By rebelCoder, 2 yearsApril 5, 2020 ago
DNA Toolkit Series

DNA Toolkit Part 3: GC Content Calculation

In this article we add GC Content Calculation functions to the DNA Toolkit

By rebelCoder, 2 yearsApril 4, 2020 ago
Bioinformatics Tools

Let’s set up a code editor for Python and Bioinformatics

In this article we install and set-up VSCode/VSCodium editor and a few plugins to make running any code easy, with just a key combination.

By rebelCoder, 2 yearsApril 3, 2020 ago
DNA Toolkit Series

DNA Toolkit Part 2: Transcription and Reverse Complement

Welcome back! Today we continue working on our DNA Toolkit project. In our last article, we created the first two functions: validate_seq and nucleotide_frequency. We are not going to change the file structure, though we will add two more functions and one data structure. The functions we add today will Read more…

By rebelCoder, 2 yearsMarch 28, 2020 ago

Posts navigation

1 2 Next
Categories
  • Bioinformatics Tools (3)
  • DNA Toolkit Series (6)
  • From Python To Rust Series (3)
  • Podcast (2)
  • Python with Qt Series (2)
  • Tips & Tricks (1)
Librepay Paypal
Crypto
  • Blog
  • About
  • Support & Donations
Girl in a jacket | Powered by Open-Source Software