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Tag: Bioinformatics in python

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From Python To Rust Series

From Python to Rust: Part 1.

May 17, 2020December 29, 2022 rebelCoder

In this series of articles, we will explore a young and very exciting programming language — Rust. We will see how Rust can help us

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DNA Toolkit Series

DNA Toolkit Part 5, 6 & 7: Open Reading Frames, Protein Search in NCBI database

April 26, 2020December 5, 2021 rebelCoder

In this article, we conclude our work on a minimal set of functions to work with DNA. We will add the last three functions that

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DNA Toolkit Series

DNA Toolkit Part 4: Translation, Codon Usage

April 5, 2020December 29, 2022 rebelCoder

In this article we are taking a look at DNA Codon table and adding a Translation and Codon Usage functions to our DNA Toolkit.

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DNA Toolkit Series

DNA Toolkit Part 3: GC Content Calculation

April 4, 2020December 29, 2022 rebelCoder

In this article we add GC Content Calculation functions to the DNA Toolkit

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Bioinformatics Tools

Let’s set up a code editor for Python and Bioinformatics

April 3, 2020December 5, 2021 rebelCoder

In this article we install and set-up VSCode/VSCodium editor and a few plugins to make running any code easy, with just a key combination.

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DNA Toolkit Series

DNA Toolkit Part 2: Transcription and Reverse Complement

March 28, 2020December 5, 2021 rebelCoder

Welcome back! Today we continue working on our DNA Toolkit project. In our last article, we created the first two functions: validate_seq and nucleotide_frequency. We

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DNA Toolkit Series

DNA Toolkit Part 1: Validating and counting nucleotides

March 28, 2020December 5, 2021 rebelCoder

In this article we start our work on a DNA Toolkit. We write and test our first two functions, DNA Validation and Nucleotide Count functions.

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DNA Toolkit Series

DNA Toolkit: Introduction

March 28, 2020December 5, 2021 rebelCoder

This amazing video (below) from the ‘MITx Bio’ team introduces a viewer to the structure of the DNA molecule. While it is an amazing way

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Posts pagination

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Categories:

  • Bioinformatics Tools (3)
  • DNA Toolkit Series (6)
  • From Python To Rust Series (3)
  • Genome Toolkit Series (4)
  • Podcast (3)
  • Python with Qt Series (2)
  • Tips & Tricks (2)

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